Dear galaxy-user,
When we want to use sam files in our local Galaxy server, we can copy the files in our local Galaxy server to "~/galaxy_dist/database/files/000/" to appear in "history" column in Galaxy window by "cp" command written in attempted script. The step, which is recognizing file guess long time. Could you please tell me if you know the methods, which are the data appear in "history" column faster.
Best regards,
Takako Mochizuki
Hello Takako,
The best way to load data locally is to use the the method described here: https://bitbucket.org/galaxy/galaxy-central/wiki/DataLibraries/UploadingFile...
Please let us know if we can help more,
Best,
Jen Galaxy team
On 12/19/10 11:08 PM, 望月 孝子 wrote:
Dear galaxy-user,
When we want to use sam files in our local Galaxy server, we can copy the files in our local Galaxy server to "~/galaxy_dist/database/files/000/" to appear in "history" column in Galaxy window by "cp" command written in attempted script. The step, which is recognizing file guess long time. Could you please tell me if you know the methods, which are the data appear in "history" column faster.
Best regards,
Takako Mochizuki
galaxy-user mailing list galaxy-user@lists.bx.psu.edu http://lists.bx.psu.edu/listinfo/galaxy-user
Hello Jen,
I tried to upload files from filesystem path using a check-box of "Copy data into Galaxy?", then I could upload faster!
Thank you very much for your help.
Best regards,
Takako Mochizuki
On 2011/01/20, at 0:11, Jennifer Jackson wrote:
Hello Takako,
The best way to load data locally is to use the the method described here: https://bitbucket.org/galaxy/galaxy-central/wiki/DataLibraries/UploadingFile...
Please let us know if we can help more,
Best,
Jen Galaxy team
On 12/19/10 11:08 PM, 望月 孝子 wrote:
Dear galaxy-user,
When we want to use sam files in our local Galaxy server, we can copy the files in our local Galaxy server to "~/galaxy_dist/database/files/000/" to appear in "history" column in Galaxy window by "cp" command written in attempted script. The step, which is recognizing file guess long time. Could you please tell me if you know the methods, which are the data appear in "history" column faster.
Best regards,
Takako Mochizuki
galaxy-user mailing list galaxy-user@lists.bx.psu.edu http://lists.bx.psu.edu/listinfo/galaxy-user
-- Jennifer Jackson http://usegalaxy.org
galaxy-user@lists.galaxyproject.org