I need to compare genome sequences of several Salmonella enterica serovars. I will be looking for regions of insertions and deletions between the strains. As well as SNPs comparisons in certain genes. Is Galaxy a good tool to use for this? -K -- Kevin Lang Junior Scientist Singer Lab of Epidemiology University of Minnesota Dept of Veterinary BioScience Lab# 612-625-9266 Cell# 612-385-5410
Hello Kevin, Galaxy would be a great fit for this type of analysis. - getting started video tutorials http://usegalaxy.org/screencast - more tutorials & help: http://usegalaxy.org/page/list_published?f-username=aun1 - wiki http://bitbucket.org/galaxy/galaxy-central/wiki/Home Thanks! Jen Galaxy team On 10/29/10 9:36 AM, Kevin S Lang wrote:
I need to compare genome sequences of several Salmonella enterica serovars. I will be looking for regions of insertions and deletions between the strains. As well as SNPs comparisons in certain genes. Is Galaxy a good tool to use for this?
-K
-- Jennifer Jackson http://usegalaxy.org
participants (2)
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Jennifer Jackson
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Kevin S Lang