Does anyone know if it is possible to trim sequencing adaptor sequences away in Galaxy? and what is the necessary format for trimming sequences? because in Clip adapter sequences I can not to see my files. thaks Diana Trejo, PhD -- This message has been scanned for viruses and dangerous content by MailScanner, and is believed to be clean.
Hello, The tool "NGS: QC and manipulation -> FASTQ Groomer" will prepare your data and make it recognized by other formatting/analysis tools, including "Clip". Please give this a try and let us know if you have any questions. For general help, please see http://galaxyproject.org/wiki/Learn Best, Jen Galaxy team On 11/14/11 11:04 AM, dtrejo@ira.cinvestav.mx wrote:
Does anyone know if it is possible to trim sequencing adaptor sequences away in Galaxy? and what is the necessary format for trimming sequences? because in Clip adapter sequences I can not to see my files.
thaks
Diana Trejo, PhD
-- Jennifer Jackson http://usegalaxy.org http://galaxyproject.org/wiki/Support
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Jennifer Jackson