Does anyone know if it is possible to trim sequencing adaptor sequences away in Galaxy? and what is the necessary format for trimming sequences? because in Clip adapter sequences I can not to see my files.
thaks
Diana Trejo, PhD
Hello,
The tool "NGS: QC and manipulation -> FASTQ Groomer" will prepare your data and make it recognized by other formatting/analysis tools, including "Clip".
Please give this a try and let us know if you have any questions. For general help, please see http://galaxyproject.org/wiki/Learn
Best,
Jen Galaxy team
On 11/14/11 11:04 AM, dtrejo@ira.cinvestav.mx wrote:
Does anyone know if it is possible to trim sequencing adaptor sequences away in Galaxy? and what is the necessary format for trimming sequences? because in Clip adapter sequences I can not to see my files.
thaks
Diana Trejo, PhD
galaxy-user@lists.galaxyproject.org