1 new commit in galaxy-central:
https://bitbucket.org/galaxy/galaxy-central/commits/237bf9f39e6d/ Changeset: 237bf9f39e6d User: guerler Date: 2014-11-25 03:34:33+00:00 Summary: ToolForm: Handle boolean definition without modifying shared code Affected #: 1 file
diff -r 622f3fd9202a009620f56fced7ff2c5461a8fdf0 -r 237bf9f39e6da44f99c291154892155b8847bd97 lib/galaxy/webapps/galaxy/api/tools.py --- a/lib/galaxy/webapps/galaxy/api/tools.py +++ b/lib/galaxy/webapps/galaxy/api/tools.py @@ -588,6 +588,21 @@ for input in inputs.itervalues(): state[input.name] = input.get_initial_value(trans, context)
+ # check the current state of a value and update it if necessary + def check_state(trans, input, default_value, context): + value = default_value + error = 'State validation failed.' + try: + # resolves the inconsistent definition of boolean parameters (see base.py) without modifying shared code + if input.type == 'boolean': + value, error = [util.string_as_bool(default_value), None] + else: + value, error = check_param(trans, input, default_value, context) + except Exception: + log.error('Checking parameter %s failed.', input.name) + pass + return [value, error] + # populates state with incoming url parameters def populate_state(trans, inputs, state, incoming, prefix="", context=None ): errors = dict() @@ -620,9 +635,9 @@ group_prefix = "%s|" % ( key ) test_param_key = group_prefix + input.test_param.name default_value = incoming.get(test_param_key, group_state.get(input.test_param.name, None)) - value, test_param_error = check_param( trans, input.test_param, default_value, context) - if test_param_error: - errors[input.name] = [test_param_error] + value, error = check_state(trans, input.test_param, default_value, context) + if error: + errors[input.name] = [error] else: current_case = input.get_current_case(value, trans) group_state = state[input.name] = {} @@ -631,16 +646,13 @@ if group_errors: errors[input.name] = group_errors group_state['__current_case__'] = current_case - group_state[ input.test_param.name ] = value + group_state[input.test_param.name] = value else: - try: - value, error = check_param(trans, input, incoming.get(key, state.get(input.name, None)), context) - if error: - errors[input.name] = error - state[input.name] = value - except Exception: - log.error('Checking parameter %s failed.', input.name) - pass + default_value = incoming.get(key, state.get(input.name, None)) + value, error = check_state(trans, input, default_value, context) + if error: + errors[input.name] = error + state[input.name] = value return errors
# builds tool model including all attributes
Repository URL: https://bitbucket.org/galaxy/galaxy-central/
--
This is a commit notification from bitbucket.org. You are receiving this because you have the service enabled, addressing the recipient of this email.