1 new commit in galaxy-central:
https://bitbucket.org/galaxy/galaxy-central/changeset/172502ced921/ changeset: 172502ced921 user: dan date: 2012-10-30 19:46:12 summary: When migrating tools, if install_dependencies is True, but tool_dependency_dir is not set, do not attempt to install, but print informative error message. affected #: 1 file
diff -r 394c3bd89926919b3ff861d5bc3daa6c7d10fd12 -r 172502ced921425b301725949bd8a82ff858bc48 lib/galaxy/tool_shed/install_manager.py --- a/lib/galaxy/tool_shed/install_manager.py +++ b/lib/galaxy/tool_shed/install_manager.py @@ -19,6 +19,10 @@ self.app = app self.toolbox = self.app.toolbox self.migrated_tools_config = migrated_tools_config + # If install_dependencies is True, but tool_dependency_dir is not set, + # do not attempt to install, but print informative error message + if install_dependencies and app.config.tool_dependency_dir is None: + raise Exception( 'You are attempting to install tool dependencies, but do not have a value for "tool_dependency_dir" set in your ini file. Please set this to the path where you would like to install dependencies and rerun the migration script.' ) # Get the local non-shed related tool panel configs (there can be more than one, and the default name is tool_conf.xml). self.proprietary_tool_confs = self.non_shed_tool_panel_configs self.proprietary_tool_panel_elems = self.get_proprietary_tool_panel_elems( latest_migration_script_number )
Repository URL: https://bitbucket.org/galaxy/galaxy-central/
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