1 new commit in galaxy-central:
https://bitbucket.org/galaxy/galaxy-central/commits/5846eb77fc8e/ Changeset: 5846eb77fc8e User: greg Date: 2014-04-29 15:34:58 Summary: Fix for determining the list of all repository dependency dictionaries when installing a repository into Galaxy that has a deep dependency hierarchy. Affected #: 1 file
diff -r e3808d426ef2387a25aa79cbba397a6ec2f0d8f5 -r 5846eb77fc8e7b49fe1cafd986e709974ec1ae87 lib/tool_shed/util/common_install_util.py --- a/lib/tool_shed/util/common_install_util.py +++ b/lib/tool_shed/util/common_install_util.py @@ -464,7 +464,15 @@ all_required_repo_info_dict[ k ] = v if required_repo_info_dicts: for required_repo_info_dict in required_repo_info_dicts: - if required_repo_info_dict not in all_repo_info_dicts: + # Each required_repo_info_dict has a single entry, and all_repo_info_dicts is a list + # of dictionaries, each of which has a single entry. We'll check keys here rather than + # the entire dictionary because a dictionary entry in all_repo_info_dicts will include + # lists of discovered repository dependencies, but these lists will be empty in the + # required_repo_info_dict since dependency discovery has not yet been performed for these + # dictionaries. + required_repo_infor_dict_key = required_repo_info_dict.keys()[ 0 ] + all_repo_info_dicts_keys = [ d.keys()[ 0 ] for d in all_repo_info_dicts ] + if required_repo_infor_dict_key not in all_repo_info_dicts_keys: all_repo_info_dicts.append( required_repo_info_dict ) all_required_repo_info_dict[ 'all_repo_info_dicts' ] = all_repo_info_dicts return all_required_repo_info_dict
Repository URL: https://bitbucket.org/galaxy/galaxy-central/
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