1 new changeset in galaxy-central:
http://bitbucket.org/galaxy/galaxy-central/changeset/8f1cabffa8f8/ changeset: r5479:8f1cabffa8f8 user: fubar date: 2011-04-29 01:57:32 summary: gcbias still failing - try 2GB of java heap... affected #: 1 file (25 bytes)
--- a/tools/picard/rgPicardGCBiasMetrics.xml Thu Apr 28 19:30:48 2011 -0400 +++ b/tools/picard/rgPicardGCBiasMetrics.xml Thu Apr 28 19:57:32 2011 -0400 @@ -41,10 +41,11 @@ help="For summary metrics, exclude GC windows that include less than this fraction of the genome. Default value: 1.0E-5." /><param name="maxheap" type="select" help="If in doubt, choose 8G and read Picard documentation please" label="Java heap size. Java is a pig, the art is long but memory is short"> + <option value="1G">1GB: very small data</option> + <option value="2G" selected="true">2GB</option><option value="4G">4GB will work for small sized datasets </option><option value="8G" selected="true" >8GB - should generally work...</option><option value="16G">16GB - try this if 8GB fails</option> - <option value="32G">32GB - please use only if absolutely necessary</option></param></inputs>
Repository URL: https://bitbucket.org/galaxy/galaxy-central/
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