1 new commit in galaxy-central:
https://bitbucket.org/galaxy/galaxy-central/changeset/2272101e8c29/ changeset: 2272101e8c29 user: jgoecks date: 2012-01-17 04:40:13 summary: Subset GFF datasets correctly when running tools in Trackster. affected #: 1 file
diff -r ec85ba64a5b751f53c2288fdbd27ae228a8d89c3 -r 2272101e8c292bd33e78cdcee37bac4a62cd5cb4 lib/galaxy/visualization/tracks/data_providers.py --- a/lib/galaxy/visualization/tracks/data_providers.py +++ b/lib/galaxy/visualization/tracks/data_providers.py @@ -857,7 +857,7 @@ reader = GFFReaderWrapper( source, fix_strand=True ) feature = reader.next() for interval in feature.intervals: - out.write(interval.raw_line + '\n') + out.write( '\t'.join( interval.fields ) + '\n' ) out.close()
def get_iterator( self, chrom, start, end ):
Repository URL: https://bitbucket.org/galaxy/galaxy-central/
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