1 new commit in galaxy-central:
https://bitbucket.org/galaxy/galaxy-central/changeset/146d0f4c29de/ changeset: 146d0f4c29de user: jgoecks date: 2012-08-23 15:04:08 summary: Fix for handling missing quality values in VCF data provider + some whitespace. Thanks to Jim Johnson for fix. affected #: 1 file
diff -r dd8a939cf0a26ea9e3cb969297bbfe7d749e88f7 -r 146d0f4c29decefb441a7133b4aa16442afdacb1 lib/galaxy/visualization/tracks/data_providers.py --- a/lib/galaxy/visualization/tracks/data_providers.py +++ b/lib/galaxy/visualization/tracks/data_providers.py @@ -625,7 +625,8 @@ end = start + len( new_seq )
# Pack line. - payload = [ hash( line ), + payload = [ + hash( line ), start, end, # ID: @@ -634,7 +635,8 @@ # TODO? VCF does not have strand, so default to positive. "+", new_seq, - float( feature[5] ) ] + None if feature[5] == '.' else float( feature[5] ) + ] rval.append(payload)
return { 'data': rval, 'message': message }
Repository URL: https://bitbucket.org/galaxy/galaxy-central/
--
This is a commit notification from bitbucket.org. You are receiving this because you have the service enabled, addressing the recipient of this email.