1 new changeset in galaxy-central:
http://bitbucket.org/galaxy/galaxy-central/changeset/c609c2574c66/ changeset: c609c2574c66 user: greg date: 2011-07-21 19:55:24 summary: Add Assaf Gordon's collect_job_timings.sh script. This shell script produces the report, combining information from SGE's QACCT with the galaxy job/dataset information.
The output contains: job, user, tool name, dbkey, total input size in bytes, waiting time in SGE queue, actual SGE executiong running time, and some other tidbits.
This allows finding how much running time each user had on the cluster, how much time each tool/user spend idly waiting, and some possible correlations between tools, dbkeys, input size and running time.
The script is tightly coupled with SGE and PostgreSQL, but can probably be adapted to PBS/MySQL. affected #: 1 file (0 bytes)
Repository URL: https://bitbucket.org/galaxy/galaxy-central/
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