[galaxy-commits] commit/galaxy-central: fubar: clean up fastqc updates a tiny bit

1 new commit in galaxy-central:

https://bitbucket.org/galaxy/galaxy-central/commits/e47d4ab26137/ Changeset: e47d4ab26137 User: fubar Date: 2013-05-30 07:01:29 Summary: clean up fastqc updates a tiny bit Affected #: 1 file

diff -r 34b03e0f3182af0601d747b7988308ddc2931149 -r e47d4ab261370d174641e0db1f5b7dd2adc96365 tools/rgenetics/rgFastQC.py --- a/tools/rgenetics/rgFastQC.py +++ b/tools/rgenetics/rgFastQC.py @@ -62,10 +62,9 @@ infname = self.opts.inputfilename linf = infname.lower() trimext = False - isgz = linf.endswith('.gz') or linf.endswith('.gzip') # decompression at upload currently does NOT remove this now bogus ending - fastqc will barf # patched may 29 2013 until this is fixed properly - if isgz: + if ( linf.endswith('.gz') or linf.endswith('.gzip') ): f = gzip.open(self.opts.input) try: testrow = f.readline()

Repository URL: https://bitbucket.org/galaxy/galaxy-central/

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