1 new commit in galaxy-central:
https://bitbucket.org/galaxy/galaxy-central/commits/dc6e0347edff/ Changeset: dc6e0347edff User: greg Date: 2013-06-24 15:47:46 Summary: Enhance the Galaxy API for installing tool shed repositories to make sure the tool_dependency_dir setting is defined in the Galaxy configuration file if installing tool dependencies along with repositories. Affected #: 1 file
diff -r acc4a2270e6a45ec03976fd53fb7b55da7b3fabc -r dc6e0347edffb96fe4e633b362ad21a9f5a83e81 lib/galaxy/webapps/galaxy/api/tool_shed_repositories.py --- a/lib/galaxy/webapps/galaxy/api/tool_shed_repositories.py +++ b/lib/galaxy/webapps/galaxy/api/tool_shed_repositories.py @@ -179,6 +179,11 @@ # Get the information about the Galaxy components (e.g., tool pane section, tool config file, etc) that will contain the repository information. install_repository_dependencies = payload.get( 'install_repository_dependencies', False ) install_tool_dependencies = payload.get( 'install_tool_dependencies', False ) + if install_tool_dependencies: + if trans.app.config.tool_dependency_dir is None: + no_tool_dependency_dir_message = "Tool dependencies can be automatically installed only if you set the value of your 'tool_dependency_dir' " + no_tool_dependency_dir_message += "setting in your Galaxy configuration file (universe_wsgi.ini) and restart your Galaxy server." + raise HTTPBadRequest( detail=no_tool_dependency_dir_message ) new_tool_panel_section = payload.get( 'new_tool_panel_section_label', '' ) shed_tool_conf = payload.get( 'shed_tool_conf', None ) if shed_tool_conf:
Repository URL: https://bitbucket.org/galaxy/galaxy-central/
--
This is a commit notification from bitbucket.org. You are receiving this because you have the service enabled, addressing the recipient of this email.