Branch: refs/heads/dev Home: https://github.com/galaxyproject/galaxy Commit: 10b9ac8c7de9e7f2c04d6a25777209abb350a0cc https://github.com/galaxyproject/galaxy/commit/10b9ac8c7de9e7f2c04d6a2577720... Author: Nicola Soranzo nicola.soranzo@earlham.ac.uk Date: 2017-09-29 (Fri, 29 Sep 2017)
Changed paths: M lib/galaxy/datatypes/molecules.py
Log Message: ----------- Stricter checks for SDF sniffing
I had a bunch of protein FASTA files being sniffed as 'sdf'.
Also fix https://github.com/galaxyproject/galaxy/issues/4558 .
Commit: e3307c5be96d479dc7731fbfefefbb1bc6854fa5 https://github.com/galaxyproject/galaxy/commit/e3307c5be96d479dc7731fbfefefb... Author: Nicola Soranzo nicola.soranzo@tgac.ac.uk Date: 2017-10-01 (Sun, 01 Oct 2017)
Changed paths: M lib/galaxy/datatypes/molecules.py A lib/galaxy/datatypes/test/chebi_57262.v3k.mol A lib/galaxy/datatypes/test/github88.v3k.sdf
Log Message: ----------- More precise SDF sniffer
First check 4th line: if this is conforming, scan up to 10000 lines. Add 2 test files downloaded from:
https://github.com/rdkit/rdkit/tree/master/Code/GraphMol/FileParsers/test_da...
Commit: 068c61a310e65055a5a7b6747696f71d0fdb0e7f https://github.com/galaxyproject/galaxy/commit/068c61a310e65055a5a7b6747696f... Author: John Chilton jmchilton@gmail.com Date: 2017-10-01 (Sun, 01 Oct 2017)
Changed paths: M lib/galaxy/datatypes/molecules.py A lib/galaxy/datatypes/test/chebi_57262.v3k.mol A lib/galaxy/datatypes/test/github88.v3k.sdf
Log Message: ----------- Merge pull request #4729 from nsoranzo/fix_molecule_datatypes
Stricter checks for SDF sniffing
Compare: https://github.com/galaxyproject/galaxy/compare/73bb4ba8c2e5...068c61a310e6