1 new commit in galaxy-central:
https://bitbucket.org/galaxy/galaxy-central/commits/ac95389c7eb5/ Changeset: ac95389c7eb5 User: greg Date: 2014-05-07 12:42:28 Summary: Fix type introduced in renaming the InstallManager to the ToolMigrationManager - thanks Nicola Soranzo. Affected #: 2 files
diff -r e7b579bec0e277f0c2e26cf23661ebfa7fa5ec2d -r ac95389c7eb502345d0321c54b750f134c5e6ba9 lib/tool_shed/galaxy_install/migrate/common.py --- a/lib/tool_shed/galaxy_install/migrate/common.py +++ b/lib/tool_shed/galaxy_install/migrate/common.py @@ -48,7 +48,7 @@ latest_migration_script_number = int( tools_migration_config.split( '_' )[ 0 ] ) # The value of migrated_tools_config is migrated_tools_conf.xml, and is reserved for # containing only those tools that have been eliminated from the distribution and moved - # to the tool shed. A side-effect of instantiating the ToolMigrationlManager is the automatic + # to the tool shed. A side-effect of instantiating the ToolMigrationManager is the automatic # installation of all appropriate tool shed repositories. self.tool_migration_manager = \ tool_migration_manager.ToolMigrationManager( app=self,
diff -r e7b579bec0e277f0c2e26cf23661ebfa7fa5ec2d -r ac95389c7eb502345d0321c54b750f134c5e6ba9 lib/tool_shed/galaxy_install/tool_migration_manager.py --- a/lib/tool_shed/galaxy_install/tool_migration_manager.py +++ b/lib/tool_shed/galaxy_install/tool_migration_manager.py @@ -24,7 +24,7 @@ log = logging.getLogger( __name__ )
-class ToolMigrationlManager( object ): +class ToolMigrationManager( object ):
def __init__( self, app, latest_migration_script_number, tool_shed_install_config, migrated_tools_config, install_dependencies ): """ @@ -446,7 +446,7 @@ from_tool_migration_manager=True ) for installed_tool_dependency in installed_tool_dependencies: if installed_tool_dependency.status == self.app.install_model.ToolDependency.installation_status.ERROR: - print '\nThe following error occurred from the InstallManager while installing tool dependency ', installed_tool_dependency.name, ':' + print '\nThe ToolMigrationManager returned the following error while installing tool dependency ', installed_tool_dependency.name, ':' print installed_tool_dependency.error_message, '\n\n' if 'datatypes' in metadata_dict: tool_shed_repository.status = self.app.install_model.ToolShedRepository.installation_status.LOADING_PROPRIETARY_DATATYPES
Repository URL: https://bitbucket.org/galaxy/galaxy-central/
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