1 new changeset in galaxy-central:
http://bitbucket.org/galaxy/galaxy-central/changeset/3e7f7c40b4fe/ changeset: 3e7f7c40b4fe branches: user: richard_burhans date: 2011-05-27 15:22:27 summary: Updated help text for genome diversity tools affected #: 3 files (501 bytes)
--- a/tools/genome_diversity/extract_flanking_dna.xml Fri May 27 11:19:16 2011 +0200 +++ b/tools/genome_diversity/extract_flanking_dna.xml Fri May 27 09:22:27 2011 -0400 @@ -54,7 +54,9 @@ <help> **What it does**
- If extracts flanking dna for the SNPs in the dataset. + It reports a DNA segment containing each SNP, with up to 200 nucleotides on + either side of the SNP position, which is indicated by "n". Fewer nucleotides + are reported if the SNP is near an end of the assembled genome fragment.
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--- a/tools/genome_diversity/select_restriction_enzymes.xml Fri May 27 11:19:16 2011 +0200 +++ b/tools/genome_diversity/select_restriction_enzymes.xml Fri May 27 09:22:27 2011 -0400 @@ -57,7 +57,9 @@ <help> **What it does**
- It selects SNPs in the dataset by restriction enzyme. + It selects the SNPs that are differentially cut by at least one of the + specified restriction enzymes. The enzymes are required to cut the amplified + segment (for the specified PCR primers) only at the SNP.
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--- a/tools/genome_diversity/select_snps.xml Fri May 27 11:19:16 2011 +0200 +++ b/tools/genome_diversity/select_snps.xml Fri May 27 09:22:27 2011 -0400 @@ -51,7 +51,9 @@ <help> **What it does**
- If selects a specified number of SNPs from the dataset. + It attempts to select a specified number of SNPs from the dataset, making them + approximately uniformly spaced relative to the reference genome. The number + actually selected may be slightly more than the specified number.
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Repository URL: https://bitbucket.org/galaxy/galaxy-central/
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