1 new changeset in galaxy-central: http://bitbucket.org/galaxy/galaxy-central/changeset/9bcf6ac08839/ changeset: r5136:9bcf6ac08839 user: jgoecks date: 2011-02-27 20:48:23 summary: Suppress most logging for cufflinks and cuffdiff as the logging can generate output that is incompatible with UTF-8 format used by database. affected #: 2 files (136 bytes) --- a/tools/ngs_rna/cuffdiff_wrapper.py Sat Feb 26 13:12:44 2011 -0500 +++ b/tools/ngs_rna/cuffdiff_wrapper.py Sun Feb 27 14:48:23 2011 -0500 @@ -135,8 +135,8 @@ # Build command. - # Base. - cmd = "cuffdiff" + # Base; always use quiet mode to avoid problems with storing log output. + cmd = "cuffdiff -q" # Add options. if options.inner_dist_std_dev: --- a/tools/ngs_rna/cufflinks_wrapper.py Sat Feb 26 13:12:44 2011 -0500 +++ b/tools/ngs_rna/cufflinks_wrapper.py Sun Feb 27 14:48:23 2011 -0500 @@ -84,8 +84,8 @@ # Build command. - # Base. - cmd = "cufflinks" + # Base; always use quiet mode to avoid problems with storing log output. + cmd = "cufflinks -q" # Add options. if options.inner_dist_std_dev: Repository URL: https://bitbucket.org/galaxy/galaxy-central/ -- This is a commit notification from bitbucket.org. You are receiving this because you have the service enabled, addressing the recipient of this email.