I am newish to Galaxy and trying to learn how I might integrate it with our workflows and LIMS for automated data handling. I am aware of the API and have looked up all the documentation that I could find. However, there are many things I cannot make sense of, and have not been able to find information to help me out. I think a good place to start asking questions is with how to run workflow_execute.py and ask what each of the parameters are and where to get the information from them
Arguments
*API key - got this and understand
*url - got this and understand
*workflow_id - I have created workflows and have been able to find what looks to be a workflow_id by clicking on the workflow name and selecting "Download or Export". It seems this may be correct, is it?
*history - a named history to use? Should this already exist? I have no idea here.
*step=src=dataset_id - ??? I have no idea ??? I have seen how to create data libraries manually at the command line; does this factor in?
If anyone has information they can help me out with, it would be much appreciated.
Thanks
Craig Blackhart
Computer Scientist
Applied Engineering Technologies
Los Alamos National Laboratory
505-665-6588
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