Re: [galaxy-dev] cannot extract genomic dna

- It needs to be a tab not spaces between the fields in that loc file - can you confirm that it is a tab? (Many editors will implicitly replace tabs with spaces.) - You need to restart Galaxy after updating that file - can you confirm it has been restarted? -John On Fri, Jul 22, 2016 at 11:34 AM, Alexandre Maucuer <alexandre.maucuer(a)inserm.fr&gt; wrote: > Hi, > I've installed a Galaxy instance on a local machine under ubuntu > 16.04. > I am trying to fetch sequences from hg19.2bit I downloaded from ucsc > as > ~/galaxy/depot/data2/galaxy/hg19$hg19.bit > I added: > hg19 /depot/data2/galaxy/hg19/hg19.2bit > to my twobit.loc file in tool-data directory > > > When running the extract genomic dna, I get the error: > "No sequences are available for 'hg19', request them by reporting this > error." > see also attached screenshot > Thanks in advance for your help > > -- > Alexandre Maucuer, Ph.D., > INSERM, France > > ___________________________________________________________ > Please keep all replies on the list by using "reply all" > in your mail client. To manage your subscriptions to this > and other Galaxy lists, please use the interface at: > https://lists.galaxyproject.org/ > > To search Galaxy mailing lists use the unified search at: > http://galaxyproject.org/search/mailinglists/