3 Apr
2012
3 Apr
'12
4:26 a.m.
On Tue, Apr 3, 2012 at 1:57 AM, Xu, Jianpeng <jianpeng.xu@emory.edu> wrote:
Hi,
I have installed our local galaxy. I have a question for Fastq Groomer:
Is it an interior tool within Galaxy ? I mean you already incorporate it into Galaxy? Or, you incorporate an external tool into Galaxy ? Do you know some programs that can be used to do the quality score conversion ?
Thanks a lot.
It is a Python script the Galaxy team wrote specifically for Galaxy, which uses the Galaxy FASTQ handling code. The source is here: https://bitbucket.org/galaxy/galaxy-central/src/default/tools/fastq/fastq_gr... https://bitbucket.org/galaxy/galaxy-central/src/default/tools/fastq/fastq_gr... Peter