Hi, I had the similar issue a while ago, and it's fixed in
https://bitbucket.org/galaxy/galaxy-central/commits/c015b82b3944f967e2c859d5...
Hope this help D
On Wed, Jan 30, 2013 at 9:39 AM, Christophe Caron < christophe.caron@sb-roscoff.fr> wrote:
Hello,
We run Galaxy (2013 January version) with load balancing mode (5 x web manager, 5 job handler) with Apache/Sun Grid Engine 6.0u4/CentOS 6.3
- Since 2 weeks, some handler job process crash during the Galaxy startup
with this error message in handlerx.log
..... Starting server in PID 13634. serving on http://127.0.0.1:8091 galaxy.jobs.handler DEBUG 2013-01-29 20:06:48,902 Stopping job 22842: galaxy.jobs.handler DEBUG 2013-01-29 20:06:48,902 stopping job 22842 in drmaa runner
- The system log files report a segfault with libdrmaa
kernel: python[13977]: segfault at 0 ip 00007f2811805dc5 sp 00007f27f4aac0a0 error 4 in libdrmaa.so.1.0[7f28116dd000+**185000]
Thanks for your help !
Christophe
--
Christophe Caron
Station Biologique / Service Informatique et Bio-informatique Place Georges Teissier - CS 90074 29688 Roscoff Cedex
Analysis and Bioinformatics for Marine Science http://abims.sb-roscoff.fr/
christophe.caron@sb-roscoff.fr
tél: +33 (0)2 98 29 25 43 / +33 (0)6 07 83 54 77
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