12 Oct
2017
12 Oct
'17
9:54 p.m.
Dear list,
thanks for giving me a workaround for yesterdays conda problem. Today I got a new one:
I tried to install RSeQC which installs (including the dependencies) without reporting an error in the galaxy admin UI.
But actually the package is not installed, e.g. infer_experiment.py can not be found in the environment. When I check the galaxy logs I find the following:
`Installing conda-forge::wheel-0.30.0-py_1 requires a minimum conda version of 4.3.`
Can I safely update conda to version 4.3? Galaxy's conda FAQ https://docs.galaxyproject.org/en/master/admin/conda_faq.html suggests 4.2.13?
Is the successful reporting of the installation a bug?
Cheers, Matthias
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Matthias Bernt
Bioinformatics Service
Molekulare Systembiologie (MOLSYB)
Helmholtz-Zentrum für Umweltforschung GmbH - UFZ/
Helmholtz Centre for Environmental Research GmbH - UFZ
Permoserstraße 15, 04318 Leipzig, Germany
Phone +49 341 235 482296,
m.bernt@ufz.de, www.ufz.de
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MinDirig Wilfried Kraus
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Prof. Dr. Dr. h.c. Georg Teutsch
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Prof. Dr. Heike Graßmann
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