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Hello all,
At my organisation's instance of galaxy, we have some connectors to talk to chado (inserting/removing GenBank & GFF files, etc).
However, for one of the workflows we plan to use, there is a script which must be run which has no input files and no output files (gmod_add_organism.pl, for those curious). This script *must* be run before another script is run (gmod_bulk_load_gff3.pl), or the database insert will fail
So my question is: Is there an easy way to specify dependencies when they depend on external factors, rather than just input/output files?
If there isn't a generalised mechanism to do this, should I just list input and output files that are never actually created or removed?
Cheers, Eric
- -- Eric Rasche Programmer II Center for Phage Technology Texas A&M University College Station, TX 77843 404-692-2048 esr@tamu.edu rasche.eric@yandex.ru