You might be able to do this by accepting a collection of SAM/BAM files as input instead. This is a quite new feature in Galaxy, see:
https://wiki.galaxyproject.org/News/2014_06_02_Galaxy_Distribution
Peter
On Wed, Sep 3, 2014 at 10:00 AM, Philippe Moncuquet philippe.mcqt@gmail.com wrote:
Hi,
I am trying to write a wrapper for a tool that take a directory containing SAM/BAM files as an input. I am not sure how to do that, is there another tool that implements this and that I can have a look at ? Any suggestions would be greatly appreciated.
Regards, Philip
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