[galaxy-dev] Setup galaxy to run on SGE cluster

Hi guys,

I am trying to configure our test galaxy to run on our SGE cluster http://wiki.g2.bx.psu.edu/Admin/Config/Performance/Cluster.

This is my first time to come across to drmaa, so a bit confused.

I installed teh galaxy on a NFS location where can be accessed clsuter-wide. I have configured in universe_wsgi.ini:

start_job_runners = drmaa default_cluster_job_runner = drmaa:///

and export the libdrmaa path: export DRMAA_LIBRARY_PATH=/opt/sge/lib/lx-amd64/libdrmaa.so.1.0

Sound like that's all. But I am not sure how galaxy can actually bind to my cluster? Anywhere I need to specify the qmaster URL etc?

Or simply configure galaxy host to be a submission host of the cluster, the galaxy will fetch all information by itself?

Kind regards, Derrick