Hey Ryan,
This happens to me every time (or nearly every time) I run tests as well and with no bearing on whether the test succeeds or not - so I suspect this is not a serious problem. I am not sure what the problem is but it seems to be a bug in Python itself.
Are you testing specific tools or Galaxy itself? If you are testing tools - sometimes it helps to `export GALAXY_TEST_VERBOSE_ERRORS=True` which can cause more details to be printed when things are failing.
-John
Exception in thread Thread-2: Traceback (most recent call last): File "/usr/lib/python2.7/threading.py", line 810, in __bootstrap_inner self.run() File "/home/john/workspace/galaxy-central/eggs/kombu-3.0.13-py2.7.egg/kombu/mixins.py", line 165, in run errors = (self.connection.connection_errors + File "/home/john/workspace/galaxy-central/eggs/kombu-3.0.13-py2.7.egg/kombu/utils/__init__.py", line 309, in __get__ value = obj.__dict__[self.__name__] = self.__get(obj) File "/home/john/workspace/galaxy-central/eggs/kombu-3.0.13-py2.7.egg/kombu/connection.py", line 819, in connection_errors return self.transport.connection_errors File "/home/john/workspace/galaxy-central/eggs/kombu-3.0.13-py2.7.egg/kombu/connection.py", line 782, in transport self._transport = self.create_transport() File "/home/john/workspace/galaxy-central/eggs/kombu-3.0.13-py2.7.egg/kombu/connection.py", line 518, in create_transport return self.get_transport_cls()(client=self) File "/home/john/workspace/galaxy-central/eggs/kombu-3.0.13-py2.7.egg/kombu/connection.py", line 524, in get_transport_cls transport_cls = get_transport_cls(transport_cls) File "/home/john/workspace/galaxy-central/eggs/kombu-3.0.13-py2.7.egg/kombu/transport/__init__.py", line 108, in get_transport_cls _transport_cache[transport] = resolve_transport(transport) File "/home/john/workspace/galaxy-central/eggs/kombu-3.0.13-py2.7.egg/kombu/transport/__init__.py", line 92, in resolve_transport return symbol_by_name(transport) File "/home/john/workspace/galaxy-central/eggs/kombu-3.0.13-py2.7.egg/kombu/utils/__init__.py", line 92, in symbol_by_name module = imp(module_name, package=package, **kwargs) File "/usr/lib/python2.7/importlib/__init__.py", line 37, in import_module __import__(name) File "/home/john/workspace/galaxy-central/eggs/kombu-3.0.13-py2.7.egg/kombu/transport/sqlalchemy/__init__.py", line 13, in <module> from kombu.transport import virtual File "/home/john/workspace/galaxy-central/eggs/kombu-3.0.13-py2.7.egg/kombu/transport/virtual/__init__.py", line 19, in <module> from multiprocessing.util import Finalize File "/usr/lib/python2.7/multiprocessing/__init__.py", line 65, in <module> from multiprocessing.util import SUBDEBUG, SUBWARNING File "/usr/lib/python2.7/multiprocessing/util.py", line 41, in <module> from subprocess import _args_from_interpreter_flags ImportError: cannot import name _args_from_interpreter_flags
On Thu, Dec 25, 2014 at 3:04 PM, Ryan G ngsbioinformatics@gmail.com wrote:
I'm trying to run the functional tests my local installation, and see this error come up when the test web server comes up. Google didn't turn up much other than that other people see this.
Most of my tests then proceed to fail so I suspect this is pretty important. How do I get around this? Is there a solution?
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