On Jun 3, 2013, at 10:13 AM, Ramon Tiburski wrote:
I have a problem with a tool in R. I can't load the RPostgreSQL library that I get the following error:
ERROR: carregando pacotes exigidos: dbi
My xml is this:
<command interpreter="bash">r_wrapper.sh $script_file</command>
<configfiles> <configfile name="script_file"> library(RPostgreSQL) ... </configfile> </configfiles>
I have this library installed at my system, what can I do?
Hi Ramon,
Have you checked to make sure that the user that Galaxy runs as is able to find the library? Is it possible that it is installed for a single user or in a non-standard path that has not been configured for the Galaxy user? Does the script work if run directly on the command line as the Galaxy user?
--nate
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