Luqman,
You can have multiple outputs. You simply list them individually under the outputs tag, such as in the following example:
<outputs> <data format="sam" name="output1" /> <data format="fasta" name="output2" /> <data format="tabular" name="output3" /> </outputs>
When passing the arguments in the command tag, you just refer to them as $output1, $output2, $output3, and so on.
If you need to, you can also have variable numbers of outputs (based on different conditions in your XML). Let us know if you need information on how to do that, or on anything else.
Regards, Kelly
On Nov 5, 2009, at 5:02 AM, Luqman Hakim B Abdul Hadi wrote:
Hi Galaxy team.
Im pretty new to Galaxy and currently trying to put it into production.
I was wondering if it is possible to have a program that outputs many output many results file and incorporate it into Galaxy?
Can you give an example of how the XML looks like?
Thanks loads!
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