10 Dec
2012
10 Dec
'12
11:08 p.m.
Are there any included with Galaxy, or do I need to download a database?
You need to download them.
Could you guys point me to a good file to test with?
Following the directions you sent I got to the point of downloading a file. I tried download ftp://ftp.ncbi.nlm.nih.gov/blast/db/nr.00.tar.gz but I don't see a *.chunk file nor *.nhr, nin, nsq etc that are referenced in the included blastdb.loc
Decompress and unpack the file and you'll find the relevant files (though everything now has extensions with p* rather than n*); add an entry to blastdb pointing to the directory with these files and you should be good to go. J.