Hello i tried to install via root and maybe it works,
However now the bash run.sh it is working, however my ldap is not working I have password incorrect and I get this error in the terminal :
galaxy.auth.providers.ldap_ad ERROR 2017-02-24 10:52:24,672 LDAP authenticate: search exception Traceback (most recent call last): File "/home/galaxy/galaxy-dist/lib/galaxy/auth/providers/ldap_ad.py", line 118, in authenticate ldap.set_option(*opt) File "/home/galaxy/galaxy-dist/.venv/lib/python2.7/site-packages/ldap/functions.py", line 135, in set_option return _ldap_function_call(None,_ldap.set_option,option,invalue) File "/home/galaxy/galaxy-dist/.venv/lib/python2.7/site-packages/ldap/functions.py", line 66, in _ldap_function_call result = func(*args,**kwargs) ValueError: option error
Any idea ?
Thanks,
Mohamed
2017-02-24 9:11 GMT+01:00 Mohamed Kassam k.mamoud@gmail.com:
Dear all,
I have migrate my old version of Galaxy to the new release V17.01, And I am facing this error when I am running run.sh, any clue ?
Installing collected packages: python-ldap Found existing installation: python-ldap 2.4.17 DEPRECATION: Uninstalling a distutils installed project (python-ldap) has been deprecated and will be removed in a future version. This is due to the fact that uninstalling a distutils project will only partially uninstall the project. Can't uninstall 'python-ldap'. No files were found to uninstall. Can't roll back python-ldap; was not uninstalled Exception: Traceback (most recent call last): File "/home/galaxy/galaxy-dist/.venv/lib/python2.7/site-packages/pip/basecommand.py", line 215, in main status = self.run(options, args) File "/home/galaxy/galaxy-dist/.venv/lib/python2.7/site- packages/pip/commands/install.py", line 342, in run prefix=options.prefix_path, File "/home/galaxy/galaxy-dist/.venv/lib/python2.7/site-packages/pip/req/req_set.py", line 784, in install **kwargs File "/home/galaxy/galaxy-dist/.venv/lib/python2.7/site- packages/pip/req/req_install.py", line 851, in install self.move_wheel_files(self.source_dir, root=root, prefix=prefix) File "/home/galaxy/galaxy-dist/.venv/lib/python2.7/site- packages/pip/req/req_install.py", line 1064, in move_wheel_files isolated=self.isolated, File "/home/galaxy/galaxy-dist/.venv/lib/python2.7/site-packages/pip/wheel.py", line 345, in move_wheel_files clobber(source, lib_dir, True) File "/home/galaxy/galaxy-dist/.venv/lib/python2.7/site-packages/pip/wheel.py", line 329, in clobber os.utime(destfile, (st.st_atime, st.st_mtime)) OSError: [Errno 1] Operation not permitted: '/home/galaxy/galaxy-dist/. venv/lib64/python2.7/site-packages/dsml.pyo'
Thanks,
Mohamed