Hi Peter, I think hmmerscan has been wrapped, but there is a missing "e" in the repository name. Look for "hmmscan" in the toolshed. The description for it is: hmmscan, for searching pfam with AA seqs. also included is hmm datatypes although hmmbuild, etc. isnt included yetX ill try to finish the rest of the hmmer suite soon Does that help? Dave C. On Tue, Feb 28, 2012 at 2:31 AM, Peter Cock <p.j.a.cock@googlemail.com>wrote:
Hello all,
Has anyone done a wrapper for HMMER2 or HMMER3? http://hmmer.janelia.org/software
I can't find anything in the Tool Shed http://toolshed.g2.bx.psu.edu/ so we are likely to look into doing this ourselves - starting with hmmerscan.
Thanks,
Peter ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at:
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