On 01/25/2012 08:20 PM, Kim, Hyunsoo wrote:
I'm kind of lost here. Does "Data Library" allow regular users to upload
files directly to Galaxy from their remote work station, or does it allow users to use
files that are already exist in Galaxy?
just to clarify: regular user can copy (ie: using scp) their data to the
galaxy server, and then use the advantages of Data Libraries, see the
"user_library_import_dir" option in the 'universe_wsgi.ini' file.
My intention was to using HTML5 file uploader which chunks large
file(> 2GB) into smaller pieces so that regular users can upload large files through
Galaxy's GUI without external FTP tool.
From: Hans-Rudolf Hotz [mailto:firstname.lastname@example.org]
Sent: Wednesday, January 25, 2012 4:02 AM
To: Kim, Hyunsoo
Subject: Re: [galaxy-dev] Uploading large file in browser
On 01/24/2012 10:27 PM, Kim, Hyunsoo wrote:
> I have local instance of galaxy and wanted to modify "upload file" so
> that I will be able to upload large files (> 2GB).
> The reason I am trying to do this in browser is that extra tools for
> FTP do not really work in my environment because of all the
> constraints and firewalls.
> I came up with jQuery file upload tool
), and the tool seems
> fine if it is possible me to integrate into my galaxy instance.
> My questions are:
> -Is it too cumbersome to achieve this goal with external tools?
> -how deep should I hit the galaxy (at the code level) to integrate
> this jquery tool?
> -Are there any alternatives to upload large files in browser without FTP?
as an alternative: have you looked into using "Data Libraries", see:
> Please keep all replies on the list by using "reply all"
> in your mail client. To manage your subscriptions to this and other
> Galaxy lists, please use the interface at: