details: http://www.bx.psu.edu/hg/galaxy/rev/1734db81efb0 changeset: 1651:1734db81efb0 user: Greg Von Kuster greg@bx.psu.edu date: Fri Dec 05 09:01:22 2008 -0500 description: Increase the version in the grouping tool due to previously changed output, change the output and increase the version of the gsummary tool.
3 file(s) affected in this change:
tools/stats/grouping.xml tools/stats/gsummary.py tools/stats/gsummary.xml
diffs (30 lines):
diff -r 6041065f86a9 -r 1734db81efb0 tools/stats/grouping.xml --- a/tools/stats/grouping.xml Thu Dec 04 15:09:57 2008 -0500 +++ b/tools/stats/grouping.xml Fri Dec 05 09:01:22 2008 -0500 @@ -1,4 +1,4 @@ -<tool id="Grouping1" name="Group" version="1.2.0"> +<tool id="Grouping1" name="Group" version="1.3.0"> <description>data by a column and perform aggregate operation on other columns.</description> <command interpreter="python"> grouping.py diff -r 6041065f86a9 -r 1734db81efb0 tools/stats/gsummary.py --- a/tools/stats/gsummary.py Thu Dec 04 15:09:57 2008 -0500 +++ b/tools/stats/gsummary.py Fri Dec 05 09:01:22 2008 -0500 @@ -100,7 +100,7 @@ stop_err( "Computation resulted in the following error: %s" % str( s ) ) summary = summary.as_py( BASIC_CONVERSION ) outfile.write( "#%s\n" % headings_str ) - outfile.write( "%s\n" % "\t".join( [ "%.3f" % ( summary[ k ] ) for k in headings ] ) ) + outfile.write( "%s\n" % "\t".join( [ "%g" % ( summary[ k ] ) for k in headings ] ) ) outfile.close()
if skipped_lines: diff -r 6041065f86a9 -r 1734db81efb0 tools/stats/gsummary.xml --- a/tools/stats/gsummary.xml Thu Dec 04 15:09:57 2008 -0500 +++ b/tools/stats/gsummary.xml Fri Dec 05 09:01:22 2008 -0500 @@ -1,4 +1,4 @@ -<tool id="Summary_Statistics1" name="Summary Statistics"> +<tool id="Summary_Statistics1" name="Summary Statistics" version="1.1.0"> <description>for any numerical column</description> <command interpreter="python">gsummary.py $input $out_file1 "$cond"</command> <inputs>