24 Jul
2012
24 Jul
'12
9:33 p.m.
Dear All,
I successfully install Galaxy onto my new MBP with 16Gb or Ram but when I tried to use Galaxy, it is painfully slow! The first test I did was to create Admin and import data (RNA-seq fastq, about 6Gb in size) into database and then history. The second test was to run fasqgroomer on this fasq and it took forever (a couple of hours and still running).
Anybody got in idea of why it is so slow? Would it be possible that Galaxy was set up to run a single process instead of 8-core processor? If that is the case, how to fix it?
Please help!
Di Nguyen Postdoc, U of W, Seattle, WA