Hi, Erick - thanks for pointing this out - I just added it back to galaxy-central. On Thu, Nov 18, 2010 at 10:00 AM, Erick Antezana <erick.antezana@gmail.com>wrote:
Hi,
I just updated my local instance and it seems that the hapmapmart.xml is missing in the repository?
galaxy.tools ERROR 2010-11-18 15:55:48,570 error reading tool from path: data_source/hapmapmart.xml Traceback (most recent call last): File "/tools/shared/bioinfo/app/galaxy/dev/lib/galaxy/tools/__init__.py", line 77, in load_tool tool = self.load_tool( os.path.join( self.tool_root_dir, path ) ) File "/tools/shared/bioinfo/app/galaxy/dev/lib/galaxy/tools/__init__.py", line 131, in load_tool tree = util.parse_xml( config_file ) File "/tools/shared/bioinfo/app/galaxy/dev/lib/galaxy/util/__init__.py", line 102, in parse_xml tree = ElementTree.parse(fname) File "/tools/shared/bioinfo/app/galaxy/dev/eggs/elementtree-1.2.6_20050316-py2.6.egg/elementtree/ElementTree.py", line 859, in parse tree.parse(source, parser) File "/tools/shared/bioinfo/app/galaxy/dev/eggs/elementtree-1.2.6_20050316-py2.6.egg/elementtree/ElementTree.py", line 576, in parse source = open(source, "rb") IOError: [Errno 2] No such file or directory: './tools/data_source/hapmapmart.xml'
thanks, Erick _______________________________________________ galaxy-dev mailing list galaxy-dev@lists.bx.psu.edu http://lists.bx.psu.edu/listinfo/galaxy-dev
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