On Jan 9, 2012, at 7:45 PM, Derrick LIN wrote:
Hi guys,
I am trying to configure our test galaxy to run on our SGE cluster http://wiki.g2.bx.psu.edu/Admin/Config/Performance/Cluster.
This is my first time to come across to drmaa, so a bit confused.
I installed teh galaxy on a NFS location where can be accessed clsuter-wide. I have configured in universe_wsgi.ini:
start_job_runners = drmaa default_cluster_job_runner = drmaa:///
and export the libdrmaa path: export DRMAA_LIBRARY_PATH=/opt/sge/lib/lx-amd64/libdrmaa.so.1.0
Sound like that's all. But I am not sure how galaxy can actually bind to my cluster? Anywhere I need to specify the qmaster URL etc?
Or simply configure galaxy host to be a submission host of the cluster, the galaxy will fetch all information by itself?
That's right Derrick. The galaxy host needs to configured as a submit host for the main qmaster.
-- Shantanu.