Re: [galaxy-dev] Nothing being tested on Test and main Tool Shed?

Thanks John, Fingers crossed we'll get some more detailed logs in a day or two :) Peter On Wed, Nov 19, 2014 at 5:48 PM, John Chilton <jmchilton(a)gmail.com&gt; wrote: > Hey Peter, > > Dave is out this week - so I have tried to fumble around and see if I > could make some progress on this. I found some bugs in a recent commit > and fixed them - that might help > (https://bitbucket.org/galaxy/galaxy-central/commits/b81798f94dc0fd14de1d5...). > I also have enabled more verbose logging that might help those > "History in error state" exceptions > (https://bitbucket.org/galaxy/galaxy-central/commits/a799879a82c54c2d1afec...) > but I am not sure it will propagate through to the tool shed API - we > will see I guess. > > If the install and test framework just picks up the latest central - > these fixes will hopefully be reflected in the next run. > > -John > > > On Wed, Nov 19, 2014 at 4:48 AM, Peter Cock <p.j.a.cock(a)googlemail.com&gt; wrote: >> >> Hi Dave, >> >> Any progress? All the following seem to have been tested >> in the last few days on the TestToolShed, but failed with >> "Exception: History in error state." >> >> https://testtoolshed.g2.bx.psu.edu/view/peterjc/blast2go >> https://testtoolshed.g2.bx.psu.edu/view/peterjc/blastxml_to_top_descr >> https://testtoolshed.g2.bx.psu.edu/view/peterjc/clinod >> https://testtoolshed.g2.bx.psu.edu/view/peterjc/fastq_paired_unpaired >> https://testtoolshed.g2.bx.psu.edu/view/peterjc/get_orfs_or_cdss >> https://testtoolshed.g2.bx.psu.edu/view/peterjc/mira_assembler >> https://testtoolshed.g2.bx.psu.edu/view/peterjc/ncbi_blast_plus >> https://testtoolshed.g2.bx.psu.edu/view/peterjc/nlstradamus >> https://testtoolshed.g2.bx.psu.edu/view/peterjc/seq_filter_by_id >> https://testtoolshed.g2.bx.psu.edu/view/peterjc/seq_primer_clip >> https://testtoolshed.g2.bx.psu.edu/view/peterjc/seq_rename >> https://testtoolshed.g2.bx.psu.edu/view/peterjc/seq_select_by_id >> >> That's about half of my TestToolShed repositories - most >> of the others report their tests passed :) >> >> I am also seeing unexpected problems with packages, e.g. >> >> https://testtoolshed.g2.bx.psu.edu/view/iuc/package_blast_plus_2_2_29 >> >> Error getting revision e78bbab7933d of repository >> package_blast_plus_2_2_29 owned by iuc: An entry for the repository >> was not found in the database. >> >> Thanks, >> >> Peter