Hi Leslie,
I face the same problem:
---
Downloading
http://pypi.python.org/packages/source/d/distribute/distribute-0.6.38.tar.gz
Extracting in /tmp/tmplcqzT1
Now working in /tmp/tmplcqzT1/distribute-0.6.38
Building a Distribute egg in
/beegfs/common/galaxy/home/server/database/tmp/tmp-toolshed-mtdqsavtj/galaxy_sequence_utils-1.0.0
Traceback (most recent call last):
File "setup.py", line 248, in <module>
scripts = scripts,
File "/software/Python/2.7.9/lib/python2.7/distutils/core.py", line 111,
in setup
_setup_distribution = dist = klass(attrs)
File "/tmp/tmplcqzT1/distribute-0.6.38/setuptools/dist.py", line 225, in
__init__
_Distribution.__init__(self,attrs)
File "/software/Python/2.7.9/lib/python2.7/distutils/dist.py", line 287,
in __init__
self.finalize_options()
File "/tmp/tmplcqzT1/distribute-0.6.38/setuptools/dist.py", line 257, in
finalize_options
ep.require(installer=self.fetch_build_egg)
File "/tmp/tmplcqzT1/distribute-0.6.38/pkg_resources.py", line 2027, in
require
working_set.resolve(self.dist.requires(self.extras),env,installer))
File "/tmp/tmplcqzT1/distribute-0.6.38/pkg_resources.py", line 2237, in
requires
dm = self._dep_map
File "/tmp/tmplcqzT1/distribute-0.6.38/pkg_resources.py", line 2466, in
_dep_map
self.__dep_map = self._compute_dependencies()
File "/tmp/tmplcqzT1/distribute-0.6.38/pkg_resources.py", line 2499, in
_compute_dependencies
common = frozenset(reqs_for_extra(None))
File "/tmp/tmplcqzT1/distribute-0.6.38/pkg_resources.py", line 2496, in
reqs_for_extra
if req.marker_fn(override={'extra':extra}):
File "/tmp/tmplcqzT1/distribute-0.6.38/_markerlib/markers.py", line 109,
in marker_fn
return eval(compiled_marker, environment)
File "<environment marker>", line 1, in <module>
NameError: name 'sys_platform' is not defined
/beegfs/common/galaxy/home/server/database/tmp/tmp-toolshed-mtdqsavtj/galaxy_sequence_utils-1.0.0/distribute-0.6.38-py2.7.egg
Traceback (most recent call last):
File "setup.py", line 9, in <module>
use_setuptools()
File
"/beegfs/common/galaxy/home/server/database/tmp/tmp-toolshed-mtdqsavtj/galaxy_sequence_utils-1.0.0/distribute_setup.py",
line 152, in use_setuptools
return _do_download(version, download_base, to_dir, download_delay)
File
"/beegfs/common/galaxy/home/server/database/tmp/tmp-toolshed-mtdqsavtj/galaxy_sequence_utils-1.0.0/distribute_setup.py",
line 132, in _do_download
_build_egg(egg, tarball, to_dir)
File
"/beegfs/common/galaxy/home/server/database/tmp/tmp-toolshed-mtdqsavtj/galaxy_sequence_utils-1.0.0/distribute_setup.py",
line 123, in _build_egg
raise IOError('Could not build the egg.')
IOError: Could not build the egg.
---
It might be an issue that distribute is not maintained any more (v0.6.38 is
used, 0.7.3 was latest version in 2013, then migrated to setuptools).
If you probably have updated setuptools (mine is version 18.3.1), it might
cause the error.
I tried to modify setup.py to use version 0.6.49 of distribute, but got the
same error.
Best,
Sven
On 10 September 2015 at 18:33, Leslie Herrera <laherrera(a)ucdavis.edu> wrote:
Hello:
My lab is currently in the process of setting Galaxy up on our server. I
have been installing the appropriate tools, but I am having difficulty
installing the package_galaxy_utils_1_0. The error message is below. If
this is something that is occuring on our end, would you please send
instuctions on how to fix it? If I have sent this email to wrong address
or you need more information, please let me know. Thank you very much for
your help.
Downloading
http://pypi.python.org/packages/source/d/distribute/distribute-0.6.38.tar.gz
Extracting in /tmp/tmp3dIIS_
Now working in /tmp/tmp3dIIS_/distribute-0.6.38
Building a Distribute egg in /scratch/tmp-toolshed-mtdKjroZR/galaxy_sequence_utils-1.0.0
Traceback (most recent call last):
File "setup.py", line 248, in <module>
scripts = scripts,
File "/usr/lib/python2.7/distutils/core.py", line 111, in setup
_setup_distribution = dist = klass(attrs)
File "/tmp/tmp3dIIS_/distribute-0.6.38/setuptools/dist.py", line 225, in
__init__
_Distribution.__init__(self,attrs)
File "/usr/lib/python2.7/distutils/dist.py", line 287, in __init__
self.finalize_options()
File "/tmp/tmp3dIIS_/distribute-0.6.38/setuptools/dist.py", line 257, in
finalize_options
ep.require(installer=self.fetch_build_egg)
File "/tmp/tmp3dIIS_/distribute-0.6.38/pkg_resources.py", line 2027, in
require
working_set.resolve(self.dist.requires(self.extras),env,installer))
File "/tmp/tmp3dIIS_/distribute-0.6.38/pkg_resources.py", line 2237, in
requires
dm = self._dep_map
File "/tmp/tmp3dIIS_/distribute-0.6.38/pkg_resources.py", line 2466, in
_dep_map
self.__dep_map = self._compute_dependencies()
File "/tmp/tmp3dIIS_/distribute-0.6.38/pkg_resources.py", line 2499, in
_compute_dependencies
common = frozenset(reqs_for_extra(None))
File "/tmp/tmp3dIIS_/distribute-0.6.38/pkg_resources.py", line 2496, in
reqs_for_extra
if req.marker_fn(override={'extra':extra}):
File "/tmp/tmp3dIIS_/distribute-0.6.38/_markerlib/markers.py", line 109, in
marker_fn
return eval(compiled_marker, environment)
File "<environment marker>", line 1, in <module>
NameError: name 'sys_platform' is not defined
/scratch/tmp-toolshed-mtdKjroZR/galaxy_sequence_utils-1.0.0/distribute-0.6.38-py2.7.egg
Traceback (most recent call last):
File "setup.py", line 9, in <module>
use_setuptools()
File
"/scratch/tmp-toolshed-mtdKjroZR/galaxy_sequence_utils-1.0.0/distribute_setup.py",
line 152, in use_setuptools
return _do_download(version, download_base, to_dir, download_delay)
File
"/scratch/tmp-toolshed-mtdKjroZR/galaxy_sequence_utils-1.0.0/distribute_setup.py",
line 132, in _do_download
_build_egg(egg, tarball, to_dir)
File
"/scratch/tmp-toolshed-mtdKjroZR/galaxy_sequence_utils-1.0.0/distribute_setup.py",
line 123, in _build_egg
raise IOError('Could not build the egg.')
IOError: Could not build the egg.
--
Leslie A Herrera
Starr Lab Junior Specialist
MCB, 139 Briggs Hall
University of California, Davis
laherrera(a)ucdavis.edu
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