On 04/08/2014 02:05 AM, Philippe Moncuquet wrote:
Hi Rudolph,
Thanks for the answer. I understand that it would make no sense to allow generation of graphics on non relevant data. My data is in tabular format and that is the reason why I was surprise not to see that button.
<outputs> <data name="tabular_file" label="report.tsv" type="tabular" format="tabular" /> </outputs>
I would re-write this like:
<outputs> <data name="tabular_file" label="report.tsv" format="tabular" /> </outputs>
Also, make sure your output is actually a table, ie it does consist of more than one (tab-separated) column.
Hans-Rudolf
I wouldn't be surprised if something was wrong in my syntax. Thanks for the help anyway.
Cheers, Philip
2014-04-07 16:52 GMT+10:00 Hans-Rudolf Hotz <hrh@fmi.ch mailto:hrh@fmi.ch>:
Hi Philip The appearance of the visualization button depends on the datatype of your output. E.g. when it is set to 'tabular', you should get the button allowing you to create a scatter plot. However, depending on your data, it might not make much sense to visualize it in 'Trackster', 'Circster' or as scatter plot. Regards, Hans-Rudolf On 04/07/2014 02:11 AM, Philippe Moncuquet wrote: Hi, I have developed a simple script that give some statistics on an assemble. It generates a tabular output. The visualization button is not available when I extend the output in the history pane. Is there any code that I need to put in my xml wrapper to get this button available ? Regards, Philip _____________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/ To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/__search/mailinglists/ <http://galaxyproject.org/search/mailinglists/>