Hi Evan,
Am 19.01.2015 um 17:43 schrieb Evan Bollig PhD:
Hey Bjoern,
I'm playing with your docker recipes (https://github.com/bgruening/docker-recipes) today and I've been waiting for the galaxyp image build to complete for about 3 hours. For the majority of that time it has been stuck on
RUN install-repository "--url http://testtoolshed.g2.bx.psu.edu/ -o bgruening --name package_openms_latest"
The Tool Shed was down today, maybe this was a reason?
What is the typical build time you experience? Any thoughts on how this could have gone wrong?
This is a good question. OpenMS is a beast. It can take several hours. On one of my computers I needed to add:
threadpool_kill_thread_limit = 31600 threadpool_hung_thread_limit = 20000
to the galaxy.ini to not get a timeout during installations. Maybe you can add this as well?
Cheers, Bjoern
Cheers, -Evan Bollig Research Associate | Application Developer | User Support Consultant Minnesota Supercomputing Institute 599 Walter Library 612 624 1447 evan@msi.umn.edu boll0107@umn.edu ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: https://lists.galaxyproject.org/
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