Anyone have any ideas on this? Thanks, -Adam -- Adam Brenner Computer Science, Undergraduate Student Donald Bren School of Information and Computer Sciences System Administrator, HPC Cluster Office of Information Technology http://hpc.oit.uci.edu/ University of California, Irvine www.ics.uci.edu/~aebrenne/ aebrenne@uci.edu On Thu, Jan 30, 2014 at 2:33 PM, Adam Brenner <aebrenne@uci.edu> wrote:
Howdy,
I am having trouble uploading data on our local instance of Galaxy here. The method is via FTP and here is the error I am seeing in the logs:
galaxy.jobs.runners DEBUG 2014-01-30 14:29:31,987 execution of external set_meta for job 1367 finished galaxy.jobs DEBUG 2014-01-30 14:29:32,016 (1367) Changing ownership of working directory with: /usr/bin/sudo -E scripts/external_chown_script.py /som/galaxy/database/job_working_directory/001/1367 root 0 galaxy.jobs ERROR 2014-01-30 14:29:32,058 (1367) Failed to change ownership of /som/galaxy/database/job_working_directory/001/1367, failing Traceback (most recent call last): File "/data/apps/galaxy/dist/lib/galaxy/jobs/__init__.py", line 870, in finish self.reclaim_ownership() File "/data/apps/galaxy/dist/lib/galaxy/jobs/__init__.py", line 1316, in reclaim_ownership self._change_ownership( self.galaxy_system_pwent[0], str( self.galaxy_system_pwent[3] ) ) File "/data/apps/galaxy/dist/lib/galaxy/jobs/__init__.py", line 1302, in _change_ownership assert p.returncode == 0 AssertionError
Any idea on how to fix the issue? Thanks, -Adam
-- Adam Brenner Computer Science, Undergraduate Student Donald Bren School of Information and Computer Sciences
System Administrator, HPC Cluster Office of Information Technology http://hpc.oit.uci.edu/
University of California, Irvine www.ics.uci.edu/~aebrenne/ aebrenne@uci.edu