Anyone have any ideas on this?
Thanks,
-Adam
--
Adam Brenner
Computer Science, Undergraduate Student
Donald Bren School of Information and Computer Sciences
System Administrator, HPC Cluster
Office of Information Technology
http://hpc.oit.uci.edu/
University of California, Irvine
www.ics.uci.edu/~aebrenne/
aebrenne(a)uci.edu
On Thu, Jan 30, 2014 at 2:33 PM, Adam Brenner <aebrenne(a)uci.edu> wrote:
Howdy,
I am having trouble uploading data on our local instance of Galaxy
here. The method is via FTP and here is the error I am seeing in the
logs:
galaxy.jobs.runners DEBUG 2014-01-30 14:29:31,987 execution of
external set_meta for job 1367 finished
galaxy.jobs DEBUG 2014-01-30 14:29:32,016 (1367) Changing ownership of
working directory with: /usr/bin/sudo -E
scripts/external_chown_script.py
/som/galaxy/database/job_working_directory/001/1367 root 0
galaxy.jobs ERROR 2014-01-30 14:29:32,058 (1367) Failed to change
ownership of /som/galaxy/database/job_working_directory/001/1367,
failing
Traceback (most recent call last):
File "/data/apps/galaxy/dist/lib/galaxy/jobs/__init__.py", line 870, in
finish
self.reclaim_ownership()
File "/data/apps/galaxy/dist/lib/galaxy/jobs/__init__.py", line
1316, in reclaim_ownership
self._change_ownership( self.galaxy_system_pwent[0], str(
self.galaxy_system_pwent[3] ) )
File "/data/apps/galaxy/dist/lib/galaxy/jobs/__init__.py", line
1302, in _change_ownership
assert p.returncode == 0
AssertionError
Any idea on how to fix the issue?
Thanks,
-Adam
--
Adam Brenner
Computer Science, Undergraduate Student
Donald Bren School of Information and Computer Sciences
System Administrator, HPC Cluster
Office of Information Technology
http://hpc.oit.uci.edu/
University of California, Irvine
www.ics.uci.edu/~aebrenne/
aebrenne(a)uci.edu