Hello,
I would like to add a new tool to my local Galaxy install but I fail. I have put the script and the xml description file in the tools/ directory and modified the tool_conf.xml file. I type sh run.sh and the end of the message on the screen is :
socket.error: (98, 'Address already in use') galaxy.jobs INFO 2010-05-07 11:19:20,397 sending stop signal to worker thread galaxy.jobs INFO 2010-05-07 11:19:20,397 job queue stopped galaxy.jobs.runners.local INFO 2010-05-07 11:19:20,397 sending stop signal to worker threads galaxy.jobs.runners.local INFO 2010-05-07 11:19:20,398 local job runner stopped galaxy.jobs INFO 2010-05-07 11:19:20,398 sending stop signal to worker thread galaxy.jobs INFO 2010-05-07 11:19:20,398 job stopper stopped
and the new tool was not available on the refreshed page of the browser.
The script being already running , I thought that could be problem (Am I right ?) and tried "run.sh --stop-daemon", which returned me "No PID file exists in paster.pid".
What is the right thing to do ?
Thanks for your help,
Loraine