On Tue, Nov 17, 2015 at 2:48 PM, John Chilton jmchilton@gmail.com wrote:
Thanks for the bug report. Somehow Galaxy isn't installing the development wheels into the transient Galaxy's virtualenv, I've wiped out my planemo caches and I can't reproduce this locally.
Perhaps unrelated, but I was seeing something similar with https://travis-ci.org/peterjc/pico_galaxy/builds/89678159 failing with:
pkg_resources.DistributionNotFound: sqlalchemy-migrate
This was despite pip having clearly installed the sqlalchemy-migrate wheel somewhere (presumably not in the right place though).
(That was using wheels under the Galaxy dev branch, the same TravisCI setup was working with eggs with the Galaxy master branch)
That was using my own virtualenv on top of the system Python. I "fixed" this by adopting the TravisCI provided Python virtualenv (which I'd been meaning to do anyway - my different TravisCI setups had diverged a bit too much),
https://travis-ci.org/peterjc/pico_galaxy/builds/91567501 https://github.com/peterjc/pico_galaxy/commit/76721536fa02b73b6cb35d1fb70c9d...
Regards,
Peter