Hello again,
1/
I managed to find WolfPsort on github. I followed the readme file and it work with the command line but when I tried to run it on galaxy with the one included in the package tmhmm and signal from peterjc, it gave me an error:
cant locate fastafmt/GetOptWarnHandler.pm
I put in my .bashrc the path of the file. I tried to put it directly in the /bin directory but it didnt change anything.
Any idea anyone?
2/in the python script I can see:
Num_thread = thread_count(sys.argv[2], default=4)
Does it means that it will use at the maximum 4 threads? Can I assume it will use 4 core in parallel?
3/I use blast + from the devteam is there any possibility to use more than 1 core? If yes where?
Thanks !
M Olivier CLAUDE- PhD Student
INSERM/UPMC UMRS ICAN 1166 Equipe 2
Faculté de médecine Pitié-Salpêtrière
91, bld de l'Hôpital - 3ème étage - Porte 305
75013 Paris