On Wed, Dec 5, 2012 at 10:56 PM, Nate Coraor <nate@bx.psu.edu> wrote:
Hi Thon,
I just committed a fix for this in 75a97c971d36 that will be available in our next distribution release. It will also match from most to least specific so you can define all of:
toolshed.g2.bx.psu.edu/repos/devteam/bwa_wrappers/bwa_wrapper/1.2.3 = foo:// toolshed.g2.bx.psu.edu/repos/devteam/bwa_wrappers/bwa_wrapper = bar:// bwa_wrapper = baz://
In this example:
- version 1.2.3 of the bwa wrapper installed from the toolshed would use foo:// - all other versions installed from the toolshed would use bar:// - any tool with <tool id="bwa_wrapper">, regardless of how it's installed (from the toolshed or directly added to tool_conf.xml) would use baz://
Only the most specific match will be used if there are multiple matches (as in the example).
--nate
Excellent - that looks much easier to work with :) Thanks, Peter