Hi, Jun. The inbuilt parameter sanitizer can be controlled - see http://wiki.galaxyproject.org/Admin/Tools/ToolConfigSyntax#A.3Csanitizer.3E_...
The <valid> sub-tag allows precise control and you can specify eg string.printable if you want ANY printable character in your parameter
Here's an example from the Tool Factory:
<param name="tool_name" type="text" value="My dynamic script" label="New tool ID and title for outputs" size="60" help="This will become the toolshed repository name so please choose thoughtfully to avoid namespace clashes with$ <sanitizer invalid_char=""> <valid initial="string.letters,string.digits"/> </sanitizer> </param>
I hope this helps?
On Sat, Oct 26, 2013 at 11:43 AM, Jun Fan j.fan@qmul.ac.uk wrote:
Hi all,****
I am trying to develop a tool which allows the user to use regularexpression to only keep the lines matching the given pattern in the output. There are many special characters, e.g. \ in \d. In the perl script the wrapper invokes, the regular expression is printed as Xd+ for the regular expression \d+. My question is how to pass these special characters including , (, ), ^ etc. correctly into the perl script.****
Best regards!****
Jun****
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