details: http://www.bx.psu.edu/hg/galaxy/rev/b16a6d767e65 changeset: 2881:b16a6d767e65 user: Greg Von Kuster greg@bx.psu.edu date: Tue Oct 13 18:15:06 2009 -0400 description: Add 2 rgenetics test files I missed for testing uploading composite data types.
2 file(s) affected in this change:
test-data/rgenetics.map test-data/rgenetics.ped
diffs (108 lines):
diff -r 738085dcc542 -r b16a6d767e65 test-data/rgenetics.map --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/rgenetics.map Tue Oct 13 18:15:06 2009 -0400 @@ -0,0 +1,10 @@ +22 rs5992809 16.5965 16596539 +22 rs12168131 16.6573 16657262 +22 rs390041 16.6629 16662916 +22 rs437633 16.6697 16669684 +22 rs450960 16.6909 16690858 +22 rs450975 16.6909 16690887 +22 rs451740 16.6912 16691174 +22 rs8139723 16.6917 16691696 +22 rs405490 16.6922 16692175 +22 rs415170 16.6935 16693517 diff -r 738085dcc542 -r b16a6d767e65 test-data/rgenetics.ped --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/rgenetics.ped Tue Oct 13 18:15:06 2009 -0400 @@ -0,0 +1,90 @@ +CH18526 NA18526 0 0 2 1 C C A A C C G G C C C C C C C C A A C C +CH18524 NA18524 0 0 1 1 C C A A C C G G C C C C C C C C A A C C +CH18529 NA18529 0 0 2 1 C C A A T C A G T C T C T C C C G A G C +CH18558 NA18558 0 0 1 1 C C A A C C G G C C C C C C C C A A C C +CH18532 NA18532 0 0 2 1 C C A A C C G G C C C C C C C C A A C C +CH18561 NA18561 0 0 1 1 C C A A C C G G T C C C T C C C G A G C +CH18562 NA18562 0 0 1 1 C C G A T C A G T C C C T C C C G A G C +CH18537 NA18537 0 0 2 2 C C A A T C A G C C C C C C C C A A C C +CH18603 NA18603 0 0 1 2 C C G A T C A G C C C C C C C C A A C C +CH18540 NA18540 0 0 2 1 C C A A C C G G C C C C C C C C A A C C +CH18605 NA18605 0 0 1 1 C C A A T T A A C C C C C C C C A A C C +CH18542 NA18542 0 0 2 1 C C G A T C G G C C C C C C C C A A C C +CH18545 NA18545 0 0 2 1 C C G A T C A G T C C C T C C C G A G C +CH18572 NA18572 0 0 1 2 C C A A T C A G C C C C C C C C A A G C +CH18547 NA18547 0 0 2 2 C C G A T C A G T C C C T C C C G A G C +CH18609 NA18609 0 0 1 1 C C A A C C G G C C C C C C C C A A C C +CH18550 NA18550 0 0 2 1 C C G G T T A A T C C C T C T C G A G C +CH18608 NA18608 0 0 1 1 C C G A T C G G C C C C C C C C A A C C +CH18552 NA18552 0 0 2 1 C C A A C C G G C C C C C C C C A A C C +CH18611 NA18611 0 0 1 1 C C G A T C A G T C C C T C C C G A G C +CH18555 NA18555 0 0 2 1 C C A A C C G G C C C C C C C C A A C C +CH18564 NA18564 0 0 2 2 C C A A T C G G C C C C C C C C A A C C +CH18566 NA18566 0 0 2 1 C C A A T C A G C C C C C C T C A A C C +CH18563 NA18563 0 0 1 1 C C A A C C G G C C C C C C C C A A C C +CH18570 NA18570 0 0 2 1 C C A A T C A G T C T C T C C C G A G C +CH18612 NA18612 0 0 1 2 C C A A T C A A T C T C T C C C G A G C +CH18571 NA18571 0 0 2 1 C C A A T C A G C C C C C C C C A A C C +CH18620 NA18620 0 0 1 1 C C A A C C G G T C T C T C C C G A G C +CH18621 NA18621 0 0 1 1 C C G G T T A A T C C C T C C C G A G C +CH18594 NA18594 0 0 2 1 C C A A T T A A C C C C C C C C A A G C +CH18622 NA18622 0 0 1 2 C C A A C C G G C C C C C C C C A A C C +CH18573 NA18573 0 0 2 2 C C A A T C A G C C C C C C C C A A C C +CH18623 NA18623 0 0 1 1 C C G A T C G G C C C C C C C C A A C C +CH18576 NA18576 0 0 2 1 C C A A C C G G C C C C C C C C A A C C +CH18577 NA18577 0 0 2 1 C C A A T C A G C C C C C C C C A A G C +CH18624 NA18624 0 0 1 1 C C A A T C A G C C C C C C C C A A C C +CH18579 NA18579 0 0 2 1 C C A A T C A G T C T C T C T C G A G C +CH18632 NA18632 0 0 1 2 C C A A C C G G C C C C C C C C A A C C +CH18582 NA18582 0 0 2 1 C C A A C C G G C C C C C C C C A A C C +CH18633 NA18633 0 0 1 1 C C G A T C G G C C C C C C C C A A C C +CH18635 NA18635 0 0 1 2 C C A A T C G G C C C C C C C C A A C C +CH18592 NA18592 0 0 2 1 C C A A C C G G C C C C C C C C A A C C +CH18636 NA18636 0 0 1 1 C C A A T C A A T C T C T C C C G A G C +CH18593 NA18593 0 0 2 2 C C A A C C G G T C T C T C C C G A G C +CH18637 NA18637 0 0 1 1 C C A A T C A G T C T C T C C C G A G C +JA18942 NA18942 0 0 2 2 C C A A C C A G C C C C C C C C A A C C +JA18940 NA18940 0 0 1 2 C C A A T C A G C C C C C C C C A A G C +JA18951 NA18951 0 0 2 2 C C G A T C A G C C C C C C C C A A C C +JA18943 NA18943 0 0 1 2 C C A A C C G G C C C C C C C C A A C C +JA18947 NA18947 0 0 2 2 C C G A T T A A C C C C C C C C A A G C +JA18944 NA18944 0 0 1 2 C C A A T C A G T C T C T C C C G A G C +JA18945 NA18945 0 0 1 2 C C A A C C G G C C C C C C C C A A C C +JA18949 NA18949 0 0 2 2 C C G A T C G G C C C C C C C C A A C C +JA18948 NA18948 0 0 1 2 C C G A T C G G C C C C C C C C A A C C +JA18952 NA18952 0 0 1 2 C C A A T C A G C C C C C C C C A A C C +JA18956 NA18956 0 0 2 2 C C A A C C A G T C T C T C C C G A G C +JA18964 NA18964 0 0 2 2 C C A A T T A A C C C C C C C C A A G C +JA18953 NA18953 0 0 1 1 C C A A T C A G C C C C C C T C A A C C +JA18968 NA18968 0 0 2 2 C C A A C C G G C C C C C C C C A A C C +JA18959 NA18959 0 0 1 2 C C G A T C G G C C C C C C C C A A C C +JA18969 NA18969 0 0 2 1 C C A A C C G G C C C C C C C C A A C C +JA18960 NA18960 0 0 1 2 C C A A T C A G T C T C T C C C G A G C +JA18961 NA18961 0 0 1 2 C C A A C C A G C C C C C C C C A A C C +JA18972 NA18972 0 0 2 2 C C G A T T A A T T T C T T C C G G G G +JA18965 NA18965 0 0 1 2 C C A A T T A A C C C C C C C C A A C C +JA18973 NA18973 0 0 2 2 C C A A C C G G C C C C C C T C A A C C +JA18966 NA18966 0 0 1 2 C C G A T C A G T C C C T C C C G A G C +JA18975 NA18975 0 0 2 2 C C A A C C G G C C C C C C C C A A G C +JA18967 NA18967 0 0 1 2 C C A A C C G G C C C C C C C C A A G C +JA18976 NA18976 0 0 2 1 C C A A C C G G C C C C C C C C A A C C +JA18978 NA18978 0 0 2 2 C C G A T C G G C C C C C C C C A A C C +JA18970 NA18970 0 0 1 1 C C G G T T A A T T C C T T C C G G G G +JA18980 NA18980 0 0 2 2 C C A A T C A G T C T C T C C C G A G C +JA18995 NA18995 0 0 1 1 C C A A T T A A C C C C C C C C A A G G +JA18981 NA18981 0 0 2 2 C C A A T C A G C C C C C C C C A A G C +JA18971 NA18971 0 0 1 2 C C A A C C G G C C C C C C C C A A C C +JA18974 NA18974 0 0 1 1 C C A A C C G G C C C C C C C C A A C C +JA18987 NA18987 0 0 2 2 C C A A C C G G C C C C C C C C A A C C +JA18990 NA18990 0 0 1 1 C C A A T C G G C C C C C C C C A A G C +JA18991 NA18991 0 0 2 2 C C A A C C G G C C C C C C C C A A C C +JA18994 NA18994 0 0 1 2 C C G A T C A G C C C C C C C C A A G C +JA18992 NA18992 0 0 2 2 C C A A T C A G C C C C C C T C A A C C +JA18997 NA18997 0 0 2 2 C C A A C C G G C C C C C C C C A A C C +JA18998 NA18998 0 0 2 2 C C A A C C G G C C C C C C T C A A C C +JA19000 NA19000 0 0 1 2 C C A A C C G G C C C C C C C C A A C C +JA19005 NA19005 0 0 1 2 C C A A C C G G C C C C C C C C A A G C +JA18999 NA18999 0 0 2 2 C C A A T C A G C C C C C C C C A A C C +JA19007 NA19007 0 0 1 2 C C A A T C A G C C C C C C C C A A G C +JA19003 NA19003 0 0 2 2 C C A A T C G G C C C C C C C C A A C C +JA19012 NA19012 0 0 1 2 C C A A 0 0 G G C C C C C C 0 0 A A C C