I am using env.sh to manage my tool dependencies:
# tool_dependency_dir/hhsuite/2.0.16/env.sh export HHPRED_DIR=/opt/galaxy-dist/tool_dependencies/hhsuite/default export HHLIB=${HHPRED_DIR}/lib/hh export PATH=${HHPRED_DIR}/bin:${HHLIB}/scripts:$PATH
Galaxy is not sourcing it. I have to manually source it before I restart Galaxy.
I am following "Using the env.sh file" and cannot get it to work. What am I missing?
Any help greatly appreciated,
thanks,
Isabelle