Hello Pieter, Please send questions like this to the galaxy-dev@bx.psu.edu or galaxy-dev@lists.bx.psu.edu mailing list rather than individual email addresses to ensure optimal, timely responses. The Tool Shed wiki contains all of the information you need: http://wiki.galaxyproject.org/Tool%20Shed This page provides a nice overview of repository features: http://wiki.galaxyproject.org/ToolShedRepositoryFeatures See additional specific pages below for each item you've listed: On Sep 11, 2013, at 11:52 AM, "Lukasse, Pieter" <pieter.lukasse@wur.nl> wrote:
Hi Greg,
I want to make a toolshed package with the following contents:
The above "package" is actually a mercurial repository in the tool shed.
· A number of tools
The following pages will provide all of the information you'll need for building Galaxy tools for the Tool Shed. http://wiki.galaxyproject.org/ToolShedToolFeatures
· Some workflows
The following pages provide information for enabling workflow sharing via the Tool Shed. http://wiki.galaxyproject.org/ToolShedWorkflowSharing
· Datatypes
Datatype features in the Tool Shed are described in the following pages: http://wiki.galaxyproject.org/ToolShedDatatypesFeatures
· Installation configurations for installing external tools like R, Gnuplot and X!Tandem
The above information is document in the "ToolShedToolFeatures" section of the wiki, specifically in the following pages: http://wiki.galaxyproject.org/ToolShedToolFeatures#Automatic_third-party_too...
· Dependencies configurations to other packages
If by "packages", you are referring to other tool shed repositories, then the documentation describing defining these relationships is located in the following pages: http://wiki.galaxyproject.org/DefiningRepositoryDependencies
Is there a HOWTO wiki page where I can find exactly which files I should add to the .zip file and how they should be named? Or maybe an example package which I could use?
Regards,
Pieter Lukasse
Wageningen UR, Plant Research International
Departments of Bioscience and Bioinformatics
Wageningen Campus, Building 107, Droevendaalsesteeg 1, 6708 PB, Wageningen, the Netherlands
+31-317480891; skype: pieter.lukasse.wur